3AEX Lyase date Feb 13, 2010
title Catalytic Intermediate Analogue Of Threonine Synthase From T Thermophilus Hb8
authors T.Murakawa, Y.Machida, H.Hayashi
compound source
Molecule: Threonine Synthase
Chain: A, B
Ec: 4.2.3.1
Engineered: Yes
Organism_scientific: Thermus Thermophilus
Organism_taxid: 300852
Strain: Hb8
Gene: Ttha0491
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 32 2 1
R_factor 0.216 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
115.252 115.252 99.709 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.10 Å
ligand AN7, PO4 enzyme Lyase E.C.4.2.3.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceProduct-assisted catalysis as the basis of the reaction specificity of threonine synthase., Murakawa T, Machida Y, Hayashi H, J Biol Chem. 2011 Jan 28;286(4):2774-84. Epub 2010 Nov 17. PMID:21084312
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk]
  • Biological Unit Coordinates (3aex.pdb1.gz) 109 Kb
  • LPC: Ligand-Protein Contacts for 3AEX
  • CSU: Contacts of Structural Units for 3AEX
  • Structure Factors (603 Kb)
  • Retrieve 3AEX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3AEX from S2C, [Save to disk]
  • Re-refined 3aex structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3AEX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3AEX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3AEX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3aex_B] [3aex] [3aex_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3AEX
  • Community annotation for 3AEX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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