3AG7	Plant Protein	date	Mar 24, 2010
title	An Auxilin-Like J-Domain Containing Protein, Jac1 J-Domain
authors	A.Takano
compound		source
Molecule: Putative Uncharacterized Protein F9e10.5 Chain: A Fragment: J-Domain, Unp Residues 551-651 Synonym: At1g75100f9e10_5, Auxilin-Like J-Domain Protein Engineered: Yes		Organism_scientific: Arabidopsis Thaliana Organism_common: Mouse-Ear Cress, Thale-Cress Organism_taxid: 3702 Strain: Columbia Gene: At1g75100, F9e10.5, Jac1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-6p
symmetry	Space Group: P 21 21 21	R_factor 0.172 R_Free 0.231
crystal cell	length a length b length c angle alpha angle beta angle gamma 32.432 39.477 68.954 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
Primary reference	Crystallographic and functional analyses of J-domain of JAC1 essential for chloroplast photorelocation movement in Arabidopsis thaliana., Takano A, Suetsugu N, Wada M, Kohda D, Plant Cell Physiol. 2010 Aug;51(8):1372-6. Epub 2010 Jun 20. PMID:20562448

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk] Biological Unit Coordinates (3ag7.pdb1.gz) 19 Kb CSU: Contacts of Structural Units for 3AG7 Structure Factors (121 Kb) Retrieve 3AG7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3AG7 from S2C, [Save to disk] Re-refined 3ag7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3AG7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3AG7

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3AG7, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ag7_A] [3ag7] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3AG7: [DnaJ ] by SMART

Other resources with information on 3AG7

Community annotation for 3AG7 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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