3ALW Viral Protein Membrane Protein date Aug 09, 2010
title Crystal Structure Of The Measles Virus Hemagglutinin Bound T Cellular Receptor Slam (Form I, Mv-H-Slam(N102hr108y) Fusi
authors T.Hashiguchi, T.Ose, M.Kubota, N.Maita, J.Kamishikiryo, K.Maenaka
compound source
Molecule: Hemagglutinin, Cdw150
Chain: A
Fragment: Hemagglutinin Head Domaincd150 V Domain, Unp Rei 140;
Synonym: Cd150, Signaling Lymphocytic Activation Molecule 1
Engineered: Yes
Mutation: Yes
Other_details: Mv-Hslam Fusion Protein
Organism_scientific: Measles Virus, Synthetic Construct, Sa Oedipus;
Organism_common: Cotton-Top Tamarin
Organism_taxid: 11234, 32630, 9490
Strain: Edmonston B, B95a
Gene: Hemagglutinin, Cd150
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293sgnti(-)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pca7
symmetry Space Group: P 63 2 2
R_factor 0.250 R_Free 0.283
crystal
cell
length a length b length c angle alpha angle beta angle gamma
209.912 209.912 180.538 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.55 Å
ligand NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the measles virus hemagglutinin bound to its cellular receptor SLAM., Hashiguchi T, Ose T, Kubota M, Maita N, Kamishikiryo J, Maenaka K, Yanagi Y, Nat Struct Mol Biol. 2011 Feb;18(2):135-41. Epub 2011 Jan 9. PMID:21217702
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk]
  • Biological Unit Coordinates (3alw.pdb1.gz) 320 Kb
  • Biological Unit Coordinates (3alw.pdb2.gz) 477 Kb
  • LPC: Ligand-Protein Contacts for 3ALW
  • CSU: Contacts of Structural Units for 3ALW
  • Structure Factors (488 Kb)
  • Retrieve 3ALW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ALW from S2C, [Save to disk]
  • Re-refined 3alw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3ALW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3ALW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3ALW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3alw_A] [3alw]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3ALW
  • Community annotation for 3ALW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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