3AS2 Hydrolase Hydrolase Inhibitor date Dec 09, 2010
title Crystal Structure Analysis Of Chitinase A From Vibrio Harvey Novel Inhibitors - W275g Mutant Complex Structure With Propentofylline
authors S.Pantoom, I.R.Vetter, H.Prinz, W.Suginta
compound source
Molecule: Chitinase A
Chain: A
Fragment: Residues 22-597
Ec: 3.2.1.14
Engineered: Yes
Mutation: Yes
Organism_scientific: Vibrio Harveyi
Organism_taxid: 669
Strain: Lmg7890
Gene: Chia
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: M15
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe60
symmetry Space Group: P 21 21 21
R_factor 0.147 R_Free 0.193
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.290 84.050 102.310 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand POY enzyme Hydrolase E.C.3.2.1.14 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePotent family-18 chitinase inhibitors: x-ray structures, affinities, and binding mechanisms., Pantoom S, Vetter IR, Prinz H, Suginta W, J Biol Chem. 2011 Jul 8;286(27):24312-23. Epub 2011 Apr 29. PMID:21531720
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk]
  • Biological Unit Coordinates (3as2.pdb1.gz) 101 Kb
  • LPC: Ligand-Protein Contacts for 3AS2
  • CSU: Contacts of Structural Units for 3AS2
  • Structure Factors (414 Kb)
  • Retrieve 3AS2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3AS2 from S2C, [Save to disk]
  • Re-refined 3as2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3AS2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3AS2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3AS2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3as2_A] [3as2]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3AS2: [Glyco_18] [PKD ] by SMART
  • Other resources with information on 3AS2
  • Community annotation for 3AS2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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