3AUQ	Transcription	date	Feb 15, 2011
title	Crystal Structure Of The Human Vitamin D Receptor Ligand Bin Domain Complexed With Yne-Diene Type Analog Of Active 14-Ep Methyl-19-Norvitamin D3
authors	S.Kakuda, M.Takimoto-Kamimura
compound		source
Molecule: Vitamin D3 Receptor Chain: A Fragment: Ligand Binding Domain Synonym: Vdr, 1,25-Dihydroxyvitamin D3 Receptor, Nuclear Re Subfamily 1 Group I Member 1; Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Vdr Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.234 R_Free 0.286
crystal cell	length a length b length c angle alpha angle beta angle gamma 44.313 52.108 132.577 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.64 Å
ligand	CA9	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Development of 14-epi-19-nortachysterol and its unprecedented binding configuration for the human vitamin D receptor., Sawada D, Tsukuda Y, Saito H, Kakuda S, Takimoto-Kamimura M, Ochiai E, Takenouchi K, Kittaka A, J Am Chem Soc. 2011 May 11;133(18):7215-21. Epub 2011 Apr 18. PMID:21500802

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk] Biological Unit Coordinates (3auq.pdb1.gz) 41 Kb LPC: Ligand-Protein Contacts for 3AUQ CSU: Contacts of Structural Units for 3AUQ Structure Factors (139 Kb) Retrieve 3AUQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3AUQ from S2C, [Save to disk] Re-refined 3auq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3AUQ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3auq_A] [3auq] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3AUQ: [HOLI ] by SMART

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