3B13	Protein Binding Signaling Protein	date	Jun 24, 2011
title	Crystal Structure Of The Dhr-2 Domain Of Dock2 In Complex Wi (T17n Mutant)
authors	K.Hanawa-Suetsugu, M.Kukimoto-Niino, C.Mishima-Tsumagari, T.Ter M.Shirouzu, Y.Fukui, S.Yokoyama
compound		source
Molecule: Dedicator Of Cytokinesis Protein 2 Chain: A, C Fragment: Dhr-2 Domain (Unp Residues 1196-1622) Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dock2, Kiaa0209 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_cell_line: Sf9 Expression_system_vector_type: Baculovirus Expression_system_vector: Pe100108-03
Molecule: Ras-Related C3 Botulinum Toxin Substrate 1 Chain: B, D Fragment: Gtpase Domain (Unp Residues 1-177) Synonym: Cell Migration-Inducing Gene 5 Protein, Ras-Like P Tc25, P21-Rac1; Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rac1, Tc25, Mig5 Expression_system: Cell-Free Synthesis Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Px080214-11
symmetry	Space Group: P 65	R_factor 0.183 R_Free 0.234
crystal cell	length a length b length c angle alpha angle beta angle gamma 168.651 168.651 129.718 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	3.01 Å
Gene Ontology	Chain Function Process Component A, C D, B
Primary reference	Structural basis for mutual relief of the Rac guanine nucleotide exchange factor DOCK2 and its partner ELMO1 from their autoinhibited forms., Hanawa-Suetsugu K, Kukimoto-Niino M, Mishima-Tsumagari C, Akasaka R, Ohsawa N, Sekine S, Ito T, Tochio N, Koshiba S, Kigawa T, Terada T, Shirouzu M, Nishikimi A, Uruno T, Katakai T, Kinashi T, Kohda D, Fukui Y, Yokoyama S, Proc Natl Acad Sci U S A. 2012 Feb 28;109(9):3305-10. Epub 2012 Feb 13. PMID:22331897

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (413 Kb) [Save to disk] Biological Unit Coordinates (3b13.pdb1.gz) 405 Kb CSU: Contacts of Structural Units for 3B13 Structure Factors (342 Kb) Retrieve 3B13 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3B13 from S2C, [Save to disk] Re-refined 3b13 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3B13 in 3D

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Visual 3D analysis of 3B13

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3B13, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3b13_A] [3b13_B] [3b13] [3b13_C] [3b13_D] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3B13: [RHO ] by SMART

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