3B8I	Lyase	date	Nov 01, 2007
title	Crystal Structure Of Oxaloacetate Decarboxylase From Pseudom Aeruginosa (Pa4872) In Complex With Oxalate And Mg2+.
authors	B.C.Narayanan, O.Herzberg
compound		source
Molecule: Pa4872 Oxaloacetate Decarboxylase Chain: A, B, C, D, E, F Ec: 4.1.1.3 Engineered: Yes		Organism_scientific: Pseudomonas Aeruginosa Organism_taxid: 208964 Strain: Pao1 Gene: Dnase1 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet3c
symmetry	Space Group: C 1 2 1	R_factor 0.191 R_Free 0.249
crystal cell	length a length b length c angle alpha angle beta angle gamma 260.065 83.835 104.874 90.00 112.14 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	GOL, MG, OXL BindingDB	enzyme	Lyase E.C.4.1.1.3 BRENDA
Gene Ontology	Chain Function Process Component F, A, D, C, E, B
Primary reference	Structure and Function of PA4872 from Pseudomonas aeruginosa, a Novel Class of Oxaloacetate Decarboxylase from the PEP Mutase/Isocitrate Lyase Superfamily(,)., Narayanan BC, Niu W, Han Y, Zou J, Mariano PS, Dunaway-Mariano D, Herzberg O, Biochemistry. 2007 Dec 15;. PMID:18081320

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (300 Kb) [Save to disk] Biological Unit Coordinates (3b8i.pdb1.gz) 197 Kb Biological Unit Coordinates (3b8i.pdb2.gz) 197 Kb LPC: Ligand-Protein Contacts for 3B8I CSU: Contacts of Structural Units for 3B8I Likely Quarternary Molecular Structure file(s) for 3B8I Structure Factors (2525 Kb) Retrieve 3B8I in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3B8I from S2C, [Save to disk] Re-refined 3b8i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3B8I, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3b8i_E] [3b8i_B] [3b8i_F] [3b8i_A] [3b8i_D] [3b8i_C] [3b8i] SWISS-PROT database: [Q9HUU1] Domain organization of [OADC_PSEAE] by SWISSPFAM

Other resources with information on 3B8I

Community annotation for 3B8I at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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