3BA6 Hydrolase date Nov 07, 2007
title Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Se Atpase
authors M.Picard, A.M.L.Winther, C.Olesen, C.Gyrup, J.P.Morth, C.Oxvig, J. P.Nissen
compound source
Molecule: Sarcoplasmicendoplasmic Reticulum Calcium Atpase
Chain: A
Synonym: Calcium Pump 1, Serca1, Sr Ca2+, -Atpase 1, Calciu Transporting Atpase Sarcoplasmic Reticulum Type, Fast Twitc Muscle Isoform, Endoplasmic Reticulum Class 12 Ca2+, Atpas
Ec: 3.6.3.8
Organism_scientific: Oryctolagus Cuniculus
Organism_common: Rabbit
Organism_taxid: 9986
Tissue: Fast Twitch Skeletal Muscle
symmetry Space Group: C 1 2 1
R_factor 0.210 R_Free 0.288
crystal
cell
length a length b length c angle alpha angle beta angle gamma
162.510 75.967 152.407 90.00 109.01 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand AN2, CA, K, PHD enzyme Hydrolase E.C.3.6.3.8 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structural basis of calcium transport by the calcium pump., Olesen C, Picard M, Winther AM, Gyrup C, Morth JP, Oxvig C, Moller JV, Nissen P, Nature. 2007 Dec 13;450(7172):1036-42. PMID:18075584
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (162 Kb) [Save to disk]
  • Biological Unit Coordinates (3ba6.pdb1.gz) 156 Kb
  • LPC: Ligand-Protein Contacts for 3BA6
  • CSU: Contacts of Structural Units for 3BA6
  • Likely Quarternary Molecular Structure file(s) for 3BA6
  • Structure Factors (788 Kb)
  • Retrieve 3BA6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3BA6 from S2C, [Save to disk]
  • Re-refined 3ba6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3BA6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3BA6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3BA6, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ba6] [3ba6_A]
  • SWISS-PROT database: [P04191]
  • Belongs to the p-type atpase (p-atpase) superfamily according to TCDB.
  • Domain organization of [AT2A1_RABIT] by SWISSPFAM
  • Domain found in 3BA6: [Cation_ATPase_N ] by SMART
  • Other resources with information on 3BA6
  • Community annotation for 3BA6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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