3BAS Contractile Protein date Nov 08, 2007
title Crystal Structure Of The N-Terminal Region Of The Scallop My Monoclinic (C2) Form
authors J.H.Brown, C.Cohen
compound source
Molecule: Myosin Heavy Chain, Striated Musclegeneral Contr Gcn4 Chimera;
Chain: A, B
Fragment: Bay Scallop Myosin (Residues 835-885)Yeast Gcn4 Transcription Factor (Residues 250-281);
Synonym: -Amino Acid Biosynthesis Regulatory Protein
Engineered: Yes
Organism_scientific: Argopecten Irradians, Saccharomyces Ce
Organism_common: , Baker'S Yeast
Organism_taxid: 31199, 4932
Strain: ,
Tissue: Adductor Muscle-
Gene: -Gcn4, Aas3, Arg9, Yel009c
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: C 1 2 1
R_factor 0.246 R_Free 0.287
crystal
cell
length a length b length c angle alpha angle beta angle gamma
123.335 44.912 39.878 90.00 95.18 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand IOD enzyme
Primary referenceAn Unstable Head-Rod Junction May Promote Folding into the Compact Off-State Conformation of Regulated Myosins., Brown JH, Yang Y, Reshetnikova L, Gourinath S, Suveges D, Kardos J, Hobor F, Reutzel R, Nyitray L, Cohen C, J Mol Biol. 2007 Nov 28;. PMID:18155233
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk]
  • Biological Unit Coordinates (3bas.pdb1.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 3BAS
  • CSU: Contacts of Structural Units for 3BAS
  • Likely Quarternary Molecular Structure file(s) for 3BAS
  • Structure Factors (66 Kb)
  • Retrieve 3BAS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3BAS from S2C, [Save to disk]
  • Re-refined 3bas structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3BAS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3BAS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3BAS, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3bas_A] [3bas_B] [3bas]
  • SWISS-PROT database: [P03069] [P24733]
  • Domain organization of [GCN4_YEAST] [MYS_AEQIR] by SWISSPFAM
  • Other resources with information on 3BAS
  • Community annotation for 3BAS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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