3BHX	Hydrolase	date	Nov 29, 2007
title	X-Ray Structure Of Human Glutamate Carboxypeptidase II (Gcpi Complex With A Transition State Analog Of Asp-Glu
authors	J.Lubkowski, C.Barinka
compound		source
Molecule: Glutamate Carboxypeptidase 2 Chain: A Fragment: Extracellular Domain Residues 44-750 Synonym: Glutamate Carboxypeptidase II, Membrane Glutamate Carboxypeptidase, Mgcp, N- Acetylated-Alpha-Linked Acidic D I, Naaladase I, Pteroylpoly-Gamma-Glutamate Carboxypeptidas Folylpoly-Gamma- Glutamate Carboxypeptidase, Fgcp, Folate H 1, Prostate- Specific Membrane Antigen, Psma, Psm; Ec: 3.4.17.21 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Folh1, Folh, Naalad1, Psm, Psma Expression_system: Drosophila Melanogaster Expression_system_common: Fruit Fly Expression_system_taxid: 7227 Expression_system_strain: Schneider'S S2 Cells Expression_system_vector_type: Plasmid
symmetry	Space Group: I 2 2 2	R_factor 0.181 R_Free 0.202
crystal cell	length a length b length c angle alpha angle beta angle gamma 101.554 130.258 159.192 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	BHX, BMA, CA, CL, MAN, NAG, ZN BindingDB	enzyme	Hydrolase E.C.3.4.17.21 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structural basis of interactions between human glutamate carboxypeptidase II and its substrate analogs., Barinka C, Hlouchova K, Rovenska M, Majer P, Dauter M, Hin N, Ko YS, Tsukamoto T, Slusher BS, Konvalinka J, Lubkowski J, J Mol Biol. 2008 Mar 7;376(5):1438-50. Epub 2008 Jan 5. PMID:18234225

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (139 Kb) [Save to disk] Biological Unit Coordinates (3bhx.pdb1.gz) 261 Kb LPC: Ligand-Protein Contacts for 3BHX CSU: Contacts of Structural Units for 3BHX Likely Quarternary Molecular Structure file(s) for 3BHX Structure Factors (744 Kb) Retrieve 3BHX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3BHX from S2C, [Save to disk] Re-refined 3bhx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3BHX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3BHX

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3BHX, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3bhx_A] [3bhx] SWISS-PROT database: [Q04609] Domain organization of [FOLH1_HUMAN] by SWISSPFAM

Other resources with information on 3BHX

Community annotation for 3BHX at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---