3BSQ Hydrolase date Dec 26, 2007
title Crystal Structure Of Human Kallikrein 7 Produced As A Secret Protein In E.Coli
authors I.S.Fernandez, L.Standker, H.J.Magert, W.G.Forssmann, G.Gimenez- A.Romero
compound source
Molecule: Kallikrein-7
Chain: A, B, C
Synonym: Hk7, Stratum Corneum Chymotryptic Enzyme, Hscce, S Protease 6;
Ec: 3.4.21.117
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Klk7
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Prho
symmetry Space Group: H 3 2
R_factor 0.217 R_Free 0.292
crystal
cell
length a length b length c angle alpha angle beta angle gamma
113.580 113.580 326.390 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.80 Å
ligand SO4 enzyme Hydrolase E.C.3.4.21.117 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceCrystal structure of human epidermal kallikrein 7 (hK7) synthesized directly in its native state in E. coli: insights into the atomic basis of its inhibition by LEKTI domain 6 (LD6)., Fernandez IS, Standker L, Magert HJ, Forssmann WG, Gimenez-Gallego G, Romero A, J Mol Biol. 2008 Apr 11;377(5):1488-97. Epub 2008 Feb 9. PMID:18329042
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (108 Kb) [Save to disk]
  • Biological Unit Coordinates (3bsq.pdb1.gz) 36 Kb
  • Biological Unit Coordinates (3bsq.pdb2.gz) 36 Kb
  • Biological Unit Coordinates (3bsq.pdb3.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 3BSQ
  • CSU: Contacts of Structural Units for 3BSQ
  • Likely Quarternary Molecular Structure file(s) for 3BSQ
  • Structure Factors (347 Kb)
  • Retrieve 3BSQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3BSQ from S2C, [Save to disk]
  • Re-refined 3bsq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3BSQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3BSQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3BSQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3bsq_A] [3bsq_C] [3bsq_B] [3bsq]
  • SWISS-PROT database: [P49862]
  • Domain organization of [KLK7_HUMAN] by SWISSPFAM
  • Domain found in 3BSQ: [Tryp_SPc ] by SMART
  • Other resources with information on 3BSQ
  • Community annotation for 3BSQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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