3BT0 Transport Protein date Dec 27, 2007
title Crystal Structure Of Transthyretin Variant V20s
authors G.Zanotti, C.Folli, L.Cendron, F.Gliubich, A.Negro, R.Berni
compound source
Molecule: Transthyretin
Chain: A, B
Synonym: Prealbumin, Tbpa, Ttr, Attr
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
symmetry Space Group: P 21 21 2
R_factor 0.209 R_Free 0.229
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.999 83.812 65.580 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.59 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • hormone activity


    • Primary referenceStructural and mutational analyses of protein-protein interactions between transthyretin and retinol-binding protein., Zanotti G, Folli C, Cendron L, Alfieri B, Nishida SK, Gliubich F, Pasquato N, Negro A, Berni R, FEBS J. 2008 Dec;275(23):5841-54. PMID:19021760
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (3bt0.pdb1.gz) 76 Kb
  • CSU: Contacts of Structural Units for 3BT0
  • Likely Quarternary Molecular Structure file(s) for 3BT0
  • Structure Factors (1539 Kb)
  • Retrieve 3BT0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3BT0 from S2C, [Save to disk]
  • Re-refined 3bt0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3BT0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3BT0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3BT0, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3bt0] [3bt0_A] [3bt0_B]
  • SWISS-PROT database: [P02766]
  • Domain organization of [TTHY_HUMAN] by SWISSPFAM
  • Domain found in 3BT0: [TR_THY ] by SMART
    • Other resources with information on 3BT0
  • Community annotation for 3BT0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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