3BWJ	Transferase Transferase Inhibitor	date	Jan 09, 2008
title	Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Compound Arc-1034
authors	D.Lavogina, N.Koenig, A.Uri, D.Bossemeyer
compound		source
Molecule: Camp-Dependent Protein Kinase, Alpha-Catalytic Su Chain: A Synonym: Pka C-Alpha Ec: 2.7.11.11 Engineered: Yes		Organism_scientific: Bos Taurus Organism_common: Bovine Organism_taxid: 9913 Gene: Prkaca Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21de3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pt7-7
symmetry	Space Group: P 21 21 21	R_factor 0.199 R_Free 0.249
crystal cell	length a length b length c angle alpha angle beta angle gamma 71.188 72.632 77.221 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	ARX, SEP, TPO BindingDB	enzyme	Transferase E.C.2.7.11.11 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structural analysis of ARC-type inhibitor (ARC-1034) binding to protein kinase A catalytic subunit and rational design of bisubstrate analogue inhibitors of basophilic protein kinases., Lavogina D, Lust M, Viil I, Konig N, Raidaru G, Rogozina J, Enkvist E, Uri A, Bossemeyer D, J Med Chem. 2009 Jan 22;52(2):308-21. PMID:19143565

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk] Biological Unit Coordinates (3bwj.pdb1.gz) 63 Kb LPC: Ligand-Protein Contacts for 3BWJ CSU: Contacts of Structural Units for 3BWJ Likely Quarternary Molecular Structure file(s) for 3BWJ Structure Factors (315 Kb) Retrieve 3BWJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3BWJ from S2C, [Save to disk] Re-refined 3bwj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3BWJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3BWJ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3BWJ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3bwj_A] [3bwj] SWISS-PROT database: [P00517] Domain organization of [KAPCA_BOVIN] by SWISSPFAM Domains found in 3BWJ: [S_TK_X] [S_TKc ] by SMART

Other resources with information on 3BWJ

Community annotation for 3BWJ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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