3C07 Transcription Regulator date Jan 18, 2008
title Crystal Structure Of A Tetr Family Transcriptional Regulator Streptomyces Coelicolor A3(2)
authors K.Tan, X.Xu, H.Zheng, A.Savchenko, A.M.Edwards, A.Joachimiak, Midw Center For Structural Genomics (Mcsg)
compound source
Molecule: Putative Tetr-Family Transcriptional Regulator
Chain: A, B
Engineered: Yes
Organism_scientific: Streptomyces Coelicolor A3(2)
Organism_taxid: 100226
Strain: A3(2) M145
Atcc: Baa-471
Gene: Sco4850, Sc5g8.18c
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P15tv Lic
symmetry Space Group: P 43 21 2
R_factor 0.218 R_Free 0.289
crystal
cell
length a length b length c angle alpha angle beta angle gamma
74.947 74.947 208.075 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand MSE, SO4 enzyme
note 3C07 supersedes 2OFL
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (3c07.pdb1.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 3C07
  • CSU: Contacts of Structural Units for 3C07
  • Likely Quarternary Molecular Structure file(s) for 3C07
  • Structure Factors (247 Kb)
  • Retrieve 3C07 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3C07 from S2C, [Save to disk]
  • Re-refined 3c07 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3C07 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3C07
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3C07, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3c07_A] [3c07] [3c07_B]
  • SWISS-PROT database: [Q9KZ96]
  • Domain organization of [Q9KZ96_STRCO] by SWISSPFAM
  • Other resources with information on 3C07
  • Community annotation for 3C07 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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