3C41 Hydrolase date Jan 29, 2008
title Abc Protein Artp In Complex With Amp-Pnpmg2+
authors P.F.Thaben, V.Eckey, F.Scheffel, W.Saenger, E.Schneider, A.Vahedi
compound source
Molecule: Amino Acid Abc Transporter (Artp)
Chain: J, K
Ec: 3.6.3.21
Engineered: Yes
Organism_scientific: Geobacillus Stearothermophilus
Organism_taxid: 1422
Strain: Dsmz 13240
Gene: Artp
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15
symmetry Space Group: P 1 21 1
R_factor 0.224 R_Free 0.277
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.277 82.921 68.630 90.00 103.90 90.00
method X-Ray Diffractionresolution 2.25 Å
ligand ANP, MG enzyme Hydrolase E.C.3.6.3.21 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
J, K


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (3c41.pdb1.gz) 79 Kb
  • LPC: Ligand-Protein Contacts for 3C41
  • CSU: Contacts of Structural Units for 3C41
  • Likely Quarternary Molecular Structure file(s) for 3C41
  • Structure Factors (151 Kb)
  • Retrieve 3C41 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3C41 from S2C, [Save to disk]
  • Re-refined 3c41 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3C41 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3C41
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3C41, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3c41] [3c41_J] [3c41_K]
  • SWISS-PROT database: [D0VWX4]
  • Domain organization of [D0VWX4_BACST] by SWISSPFAM
  • Domain found in 3C41: [AAA ] by SMART
  • Other resources with information on 3C41
  • Community annotation for 3C41 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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