3C5N Signaling Protein date Jan 31, 2008
title Structure Of Human Tulp1 In Complex With Ip3
authors R.D.Busam, L.Lehtio, C.H.Arrowsmith, R.Collins, L.G.Dahlgren, A.M S.Flodin, A.Flores, S.Graslund, M.Hammarstrom, B.M.Hallberg, M.D A.Johansson, I.Johansson, A.Kallas, T.Karlberg, T.Kotenyova, M.M M.E.Nilsson, P.Nordlund, T.Nyman, C.Persson, J.Sagemark, L.Svens A.G.Thorsell, L.Tresaugues, S.Van Den Berg, J.Weigelt, M.Welin, H.Berglund, Structural Genomics Consortium (Sgc)
compound source
Molecule: Tubby-Related Protein 1
Chain: A, B
Fragment: Unp Residues 291-536
Synonym: Tubby-Like Protein 1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tulp1, Tubl1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.189 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.310 83.630 57.680 90.00 94.01 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand I3P enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (233 Kb) [Save to disk]
  • Biological Unit Coordinates (3c5n.pdb1.gz) 115 Kb
  • Biological Unit Coordinates (3c5n.pdb2.gz) 114 Kb
  • LPC: Ligand-Protein Contacts for 3C5N
  • CSU: Contacts of Structural Units for 3C5N
  • Likely Quarternary Molecular Structure file(s) for 3C5N
  • Structure Factors (721 Kb)
  • Retrieve 3C5N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3C5N from S2C, [Save to disk]
  • Re-refined 3c5n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3C5N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3C5N
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3C5N, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3c5n_A] [3c5n_B] [3c5n]
  • SWISS-PROT database: [O00294]
  • Domain organization of [TULP1_HUMAN] by SWISSPFAM
    • Other resources with information on 3C5N
  • Community annotation for 3C5N at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science