3C7P Lyase date Feb 08, 2008
title Crystal Structure Of Human Carbonic Anhydrase II In Complex Stx237
authors A.Di Fiore, G.De Simone
compound source
Molecule: Carbonic Anhydrase 2
Chain: A
Synonym: Carbonic Anhydrase II, Carbonate Dehydratase II, C Carbonic Anhydrase C, Cac;
Ec: 4.2.1.1
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1 21 1
R_factor 0.181 R_Free 0.202
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.050 41.440 71.670 90.00 104.35 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand CL, GOL, MBO, POF, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAnticancer steroid sulfatase inhibitors: synthesis of a potent fluorinated second-generation agent, in vitro and in vivo activities, molecular modeling, and protein crystallography., Woo LW, Fischer DS, Sharland CM, Trusselle M, Foster PA, Chander SK, Di Fiore A, Supuran CT, De Simone G, Purohit A, Reed MJ, Potter BV, Mol Cancer Ther. 2008 Aug;7(8):2435-44. PMID:18723489
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (3c7p.pdb1.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 3C7P
  • CSU: Contacts of Structural Units for 3C7P
  • Likely Quarternary Molecular Structure file(s) for 3C7P
  • Structure Factors (312 Kb)
  • Retrieve 3C7P in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3C7P from S2C, [Save to disk]
  • Re-refined 3c7p structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3C7P in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3C7P
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3C7P, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3c7p_A] [3c7p]
  • SWISS-PROT database: [P00918]
  • Domain organization of [CAH2_HUMAN] by SWISSPFAM
  • Domain found in 3C7P: [Carb_anhydrase ] by SMART
  • Other resources with information on 3C7P
  • Community annotation for 3C7P at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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