3CBG Transferase date Feb 22, 2008
title Functional And Structural Characterization Of A Cationdepend Methyltransferase From The Cyanobacterium Synechocystis Sp. Pcc 6803
authors J.G.Kopycki, P.Neumann, M.T.Stubbs
compound source
Molecule: O-Methyltransferase
Chain: A
Ec: 2.1.1.-
Engineered: Yes
Organism_scientific: Synechocystis Sp.
Organism_taxid: 1148
Strain: Pcc 6803
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: M15 Prep4
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe30
symmetry Space Group: P 31 2 1
R_factor 0.152 R_Free 0.216
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.622 57.622 119.834 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand 4FE, FER, MG, SAH enzyme Transferase E.C.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFunctional and structural characterization of a cation-dependent O-methyltransferase from the cyanobacterium synechocystis SP. strain PCC 6803., Kopycki JG, Stubbs MT, Brandt W, Hagemann M, Porzel A, Schmidt J, Schliemann W, Zenk MH, Vogt T, J Biol Chem. 2008 May 23;. PMID:18502765
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (3cbg.pdb1.gz) 74 Kb
  • LPC: Ligand-Protein Contacts for 3CBG
  • CSU: Contacts of Structural Units for 3CBG
  • Likely Quarternary Molecular Structure file(s) for 3CBG
  • Structure Factors (102 Kb)
  • Retrieve 3CBG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3CBG from S2C, [Save to disk]
  • Re-refined 3cbg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3CBG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3CBG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3CBG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3cbg_A] [3cbg]
  • SWISS-PROT database: [Q55813]
  • Domain organization of [Q55813_SYNY3] by SWISSPFAM
  • Other resources with information on 3CBG
  • Community annotation for 3CBG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science