3CMH Contractile Protein date Sep 03, 1998
title Synthetic Linear Truncated Endothelin-1 Agonist
authors C.M.Hewage, L.Jiang, J.A.Parkinson, R.Ramage, I.H.Sadler
compound source
Molecule: Protein (Endothelin-1)
Chain: A
Engineered: Yes
Other_details: Truncated Et-1 Analogue Aib At Position 11
 Synthetic: Yes
Other_details: The Peptide Was Chemically Synthesized From Biological Source.
methodSolution NMR
ligand AIB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of a novel ETB receptor selective agonist ET1-21 [Cys(Acm)1,15, Aib3,11, Leu7] by nuclear magnetic resonance spectroscopy and molecular modelling., Hewage CM, Jiang L, Parkinson JA, Ramage R, Sadler IH, J Pept Res 1999 Mar;53(3):223-33. PMID:10231710
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (6 Kb) [Save to disk]
  • Biological Unit Coordinates (3cmh.pdb1.gz) 5 Kb
  • LPC: Ligand-Protein Contacts for 3CMH
  • CSU: Contacts of Structural Units for 3CMH
  • Retrieve 3CMH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3CMH from S2C, [Save to disk]
    • View 3CMH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3CMH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3CMH, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d3cmha_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3cmh_A] [3cmh]
  • SWISS-PROT database: [P22388]
  • Domain organization of [EDN1_RAT] by SWISSPFAM
    • Other resources with information on 3CMH
  • Community annotation for 3CMH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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