3COX Oxidoreductase(Oxygen Receptor) date Jun 14, 1993
title Crystal Structure Of Cholesterol Oxidase Complexed With A St Substrate. Implications For Fad Dependent Alcohol Oxidases
authors A.Vrielink, J.Li, P.Brick, D.M.Blow
compound source
Molecule: Cholesterol Oxidase
Chain: A
Ec: 1.1.3.6
Engineered: Yes
 Organism_scientific: Brevibacterium Sterolicum
Organism_taxid: 1702
symmetry Space Group: P 21 21 21
R_factor 0.156 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
67.720 84.580 88.130 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand FAD enzyme Oxidoreductase E.C.1.1.3.6 BRENDA
note 3COX supersedes 1COX
related structures by homologous chain: 1COY
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of cholesterol oxidase complexed with a steroid substrate: implications for flavin adenine dinucleotide dependent alcohol oxidases., Li J, Vrielink A, Brick P, Blow DM, Biochemistry 1993 Nov 2;32(43):11507-15. PMID:8218217
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk]
  • Biological Unit Coordinates (3cox.pdb1.gz) 84 Kb
  • LPC: Ligand-Protein Contacts for 3COX
  • CSU: Contacts of Structural Units for 3COX
  • Likely Quarternary Molecular Structure file(s) for 3COX
  • Structure Factors (336 Kb)
  • Retrieve 3COX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3COX from S2C, [Save to disk]
  • Re-refined 3cox structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3COX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3COX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3COX, from MSDmotif at EBI
  • Genome occurence of 3COX's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d3cox_2, region 319-450 [Jmol] [rasmolscript] [script source]
        - Domain d3cox_1, region 5-318,451-506 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3cox] [3cox_A]
  • SWISS-PROT database: [P22637]
  • Domain organization of [CHOD_BREST] by SWISSPFAM
    • Other resources with information on 3COX
  • Community annotation for 3COX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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