3CP7 Hydrolase date Mar 31, 2008
title Crystal Structure Of A Thermostable Serine Protease Al20 Fro Extremophilic Microoganism
authors N.Yang, J.Nan, X.D.Su
compound source
Molecule: Alkaline Serine Protease Al20
Chain: A, B
Ec: 3.4.21.1
Organism_scientific: Nesterenkonia Abyssinica
symmetry Space Group: H 3
R_factor 0.178 R_Free 0.199
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.260 92.260 137.880 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.39 Å
ligand FMT enzyme Hydrolase E.C.3.4.21.1 BRENDA
note 3CP7 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • serine-type endopeptidase ac...


  • Primary referenceCrystal structure of an alkaline serine protease from Nesterenkonia sp. defines a novel family of secreted bacterial proteases., Yang N, Nan J, Brostromer E, Hatti-Kaul R, Su XD, Proteins. 2008 Dec;73(4):1072-5. PMID:18814301
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (3cp7.pdb1.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 3CP7
  • CSU: Contacts of Structural Units for 3CP7
  • Likely Quarternary Molecular Structure file(s) for 3CP7
  • Structure Factors (783 Kb)
  • Retrieve 3CP7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3CP7 from S2C, [Save to disk]
  • Re-refined 3cp7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3CP7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3CP7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3CP7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3cp7] [3cp7_A] [3cp7_B]
  • SWISS-PROT database: [D0VWT7]
  • Domain organization of [D0VWT7_9MICC] by SWISSPFAM
  • Other resources with information on 3CP7
  • Community annotation for 3CP7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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