3CQW	Transferase	date	Apr 03, 2008
title	Crystal Structure Of Akt-1 Complexed With Substrate Peptide Inhibitor
authors	J.Pandit
compound		source
Molecule: Rac-Alpha Serinethreonine-Protein Kinase Chain: A Fragment: Kinase And Agc-Kinase C-Terminal Domains Synonym: Rac-Pk-Alpha, Protein Kinase B, Pkb, C-Akt Ec: 2.7.11.1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Akt1, Pkb, Rac Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf9 Expression_system_vector_type: Baculovirus
Molecule: Glycogen Synthase Kinase-3 Beta Chain: C Fragment: Residues 3-12 Synonym: Gsk-3 Beta Ec: 2.7.11.26 Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 1 21 1	R_factor 0.200 R_Free 0.257
crystal cell	length a length b length c angle alpha angle beta angle gamma 42.505 55.879 92.864 90.00 102.36 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	CQW, MN, TPO BindingDB	enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Synthesis and structure based optimization of novel Akt inhibitors., Lippa B, Pan G, Corbett M, Li C, Kauffman GS, Pandit J, Robinson S, Wei L, Kozina E, Marr ES, Borzillo G, Knauth E, Barbacci-Tobin EG, Vincent P, Troutman M, Baker D, Rajamohan F, Kakar S, Clark T, Morris J, Bioorg Med Chem Lett. 2008 Apr 15;. PMID:18456494

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk] Biological Unit Coordinates (3cqw.pdb1.gz) 59 Kb LPC: Ligand-Protein Contacts for 3CQW CSU: Contacts of Structural Units for 3CQW Likely Quarternary Molecular Structure file(s) for 3CQW Structure Factors (1261 Kb) Retrieve 3CQW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3CQW from S2C, [Save to disk] Re-refined 3cqw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3CQW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3CQW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3CQW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3cqw] [3cqw_C] [3cqw_A] SWISS-PROT database: [P31749] [P49841] Domain organization of [AKT1_HUMAN] [GSK3B_HUMAN] by SWISSPFAM Domains found in 3CQW: [S_TK_X] [S_TKc ] by SMART

Other resources with information on 3CQW

Community annotation for 3CQW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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