3CQZ | Transcription Toxin | date | Apr 03, 2008 |
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title | Crystal Structure Of 10 Subunit Rna Polymerase II In Complex Inhibitor Alpha-Amanitin | ||||||||||||||
authors | C.D.Kaplan, K.M.Larsson, R.D.Kornberg | ||||||||||||||
compound | source | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb1 Chain: A Synonym: Rna Polymerase II Subunit B1, Rna Polymerase II Su Dna-Directed Rna Polymerase III Largest Subunit, B220; Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast, Lager Beer Yeast, Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb2 Chain: B Synonym: Rna Polymerase II Subunit 2, Dna-Directed Rna Poly 140 Kda Polypeptide, B150; Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast, Lager Beer Yeast, Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb3 Chain: C Synonym: Rna Polymerase II Subunit B3, Rna Polymerase II Su Dna-Directed Rna Polymerase II 45 Kda Polypeptide, B44.5; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast, Lager Beer Yeast, Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: E Synonym: Rna Polymerases I, II, And III Subunit Abc1, Dna- Rna Polymerases I, II, And III 27 Kda Polypeptide, Abc27; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast, Lager Beer Yeast, Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: F Synonym: Rna Polymerases I, II, And III Subunit Abc2, Dna- Rna Polymerases I, II, And III 23 Kda Polypeptide, Abc23; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast, Lager Beer Yeast, Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: H Synonym: Rna Polymerases I, II, And III Subunit Abc3, Dna- Rna Polymerases I, II, And III 14.5 Kda Polypeptide, Abc14. Abc14.4; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast, Lager Beer Yeast, Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb9 Chain: I Synonym: Rna Polymerase II Subunit B9, Dna-Directed Rna Pol Subunit 9, Dna-Directed Rna Polymerase II 14.2 Kda Polypept B12.6; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast, Lager Beer Yeast, Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: J Synonym: Rna Polymerases I, II, And III Subunit Abc5, Dna- Rna Polymerases I, II, And III 8.3 Kda Polypeptide, Abc10-B |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast, Lager Beer Yeast, Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb11 Chain: K Synonym: Rna Polymerase II Subunit B11, Dna-Directed Rna Po II 13.6 Kda Polypeptide, B13.6; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast, Lager Beer Yeast, Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: L Synonym: Rna Polymerases I, II, And III Subunit Abc4, Abc10 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast, Lager Beer Yeast, Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Alpha-Amanitin Chain: M Synonym: Amatoxin, Alpha Amanitin Engineered: Yes |
Synthetic: Yes Organism_scientific: Amanita Phalloides Organism_taxid: 67723 | ||||||||||||||
symmetry | Space Group: I 2 2 2 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 2.80 Å | ||||||||||||
ligand | CSX, HYP, ILX, TRX, ZN | enzyme | Transferase E.C.2.7.7.6 BRENDA | ||||||||||||
note | 3CQZ is a representative structure | ||||||||||||||
Gene Ontology | |||||||||||||||
Primary reference | The RNA polymerase II trigger loop functions in substrate selection and is directly targeted by alpha-amanitin., Kaplan CD, Larsson KM, Kornberg RD, Mol Cell. 2008 Jun 6;30(5):547-56. PMID:18538653 |
Data retrieval |
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OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |