3CRT Transferase date Apr 07, 2008
title Structural Characterization Of An Engineered Allosteric Prot
authors M.Sagermann, R.Chapleau, E.Delorimier, M.Lei
compound source
Molecule: Glutathione S-Transferase Class-Mu 26 Kda Isozyme
Chain: A
Synonym: Gst 26, Sj26 Antigen, Sjgst
Ec: 2.5.1.18
Engineered: Yes
Mutation: Yes
Organism_scientific: Schistosoma Japonicum
Organism_common: Blood Fluke
Organism_taxid: 6182
Gene: Gst
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21-Ai
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet151
symmetry Space Group: P 43 21 2
R_factor 0.227 R_Free 0.257
crystal
cell
length a length b length c angle alpha angle beta angle gamma
91.180 91.180 57.530 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand GSH enzyme Transferase E.C.2.5.1.18 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceUsing affinity chromatography to engineer and characterize pH-dependent protein switches., Sagermann M, Chapleau RR, DeLorimier E, Lei M, Protein Sci. 2009 Jan;18(1):217-28. PMID:19177365
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (3crt.pdb1.gz) 76 Kb
  • LPC: Ligand-Protein Contacts for 3CRT
  • CSU: Contacts of Structural Units for 3CRT
  • Likely Quarternary Molecular Structure file(s) for 3CRT
  • Structure Factors (522 Kb)
  • Retrieve 3CRT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3CRT from S2C, [Save to disk]
  • Re-refined 3crt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3CRT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3CRT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3CRT, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3crt] [3crt_A]
  • SWISS-PROT database: [P08515]
  • Domain organization of [GST26_SCHJA] by SWISSPFAM
  • Other resources with information on 3CRT
  • Community annotation for 3CRT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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