3CWO De Novo Protein date Apr 22, 2008
title A Betaalpha-Barrel Built By The Combination Of Fragments Fr Different Folds
authors T.A.M.Bharat, S.Eisenbeis, K.Zeth, B.Hocker
compound source
Molecule: Betaalpha-Barrel Protein Based On 1thf And 1tmy
Chain: X
Engineered: Yes
Other_details: Residues 1-11 And 34-103 From 1tmy, 103-253
 Organism_scientific: Thermotoga Maritima
Organism_taxid: 2336
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41 21 2
R_factor 0.221 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
108.840 108.840 80.410 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.10 Å
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
X


Primary referenceA beta alpha-barrel built by the combination of fragments from different folds., Bharat TA, Eisenbeis S, Zeth K, Hocker B, Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):9942-7. Epub 2008 Jul 15. PMID:18632584
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (3cwo.pdb1.gz) 72 Kb
  • Biological Unit Coordinates (3cwo.pdb2.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 3CWO
  • CSU: Contacts of Structural Units for 3CWO
  • Likely Quarternary Molecular Structure file(s) for 3CWO
  • Structure Factors (51 Kb)
  • Retrieve 3CWO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3CWO from S2C, [Save to disk]
  • Re-refined 3cwo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3CWO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3CWO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3CWO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3cwo_X] [3cwo]
  • SWISS-PROT database: [Q9X0C6]
  • Domain organization of [HIS6_THEMA] by SWISSPFAM
  • Domain found in 3CWO: [REC ] by SMART
    • Other resources with information on 3CWO
  • Community annotation for 3CWO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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