3D31 Transport Protein date May 09, 2008
title Modbc From Methanosarcina Acetivorans
authors S.Gerber, M.Comellas-Bigler, K.P.Locher
compound source
Molecule: Sulfatemolybdate Abc Transporter, Atp-Binding Pr
Chain: A, B
Engineered: Yes
Organism_scientific: Methanosarcina Acetivorans
Strain: C2a
Expression_system: Escherichia Coli

Molecule: Sulfatemolybdate Abc Transporter, Permease Prote
Chain: C, D
Engineered: Yes

Organism_scientific: Methanosarcina Acetivorans
Expression_system: Escherichia Coli
symmetry Space Group: P 21 21 21
R_factor 0.251 R_Free 0.282
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.840 139.460 207.330 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand WO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


D, C


Primary referenceStructural Basis of Trans-Inhibition in a Molybdate/tungstate ABC Transporter., Gerber S, Comellas-Bigler M, Goetz BA, Locher KP, Science. 2008 May 29;. PMID:18511655
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (178 Kb) [Save to disk]
  • Biological Unit Coordinates (3d31.pdb1.gz) 173 Kb
  • Biological Unit Coordinates (3d31.pdb2.gz) 88 Kb
  • Biological Unit Coordinates (3d31.pdb3.gz) 88 Kb
  • LPC: Ligand-Protein Contacts for 3D31
  • CSU: Contacts of Structural Units for 3D31
  • Likely Quarternary Molecular Structure file(s) for 3D31
  • Structure Factors (349 Kb)
  • Retrieve 3D31 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3D31 from S2C, [Save to disk]
  • Re-refined 3d31 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3D31 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3D31
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3D31, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3d31_B] [3d31] [3d31_A] [3d31_D] [3d31_C]
  • SWISS-PROT database: [Q8TTZ3] [Q8TTZ4]
  • Domain organization of [Q8TTZ3_METAC] [Q8TTZ4_METAC] by SWISSPFAM
  • Domain found in 3D31: [AAA ] by SMART
  • Other resources with information on 3D31
  • Community annotation for 3D31 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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