3D7T	Transferase	date	May 21, 2008
title	Structural Basis For The Recognition Of C-Src By Its Inactiv
authors	N.M.Levinson, M.A.Seeliger, P.A.Cole, J.Kuriyan
compound		source
Molecule: Tyrosine-Protein Kinase Csk Chain: A Fragment: Csk Kinase Domain Synonym: C-Src Kinase, Protein-Tyrosine Kinase Cyl Ec: 2.7.10.2 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Csk Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 De3
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Src Chain: B Fragment: C-Src Kinase Domain Synonym: Pp60c-Src, P60-Src, C-Src Ec: 2.7.10.2 Engineered: Yes		Organism_scientific: Gallus Gallus Organism_common: Chicken Organism_taxid: 9031 Gene: Src Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 De3
symmetry	Space Group: P 31 2 1	R_factor 0.237 R_Free 0.278
crystal cell	length a length b length c angle alpha angle beta angle gamma 99.646 99.646 137.058 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.90 Å
ligand	STU BindingDB	enzyme	Transferase E.C.2.7.10.2 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural basis for the recognition of c-Src by its inactivator Csk., Levinson NM, Seeliger MA, Cole PA, Kuriyan J, Cell. 2008 Jul 11;134(1):124-34. PMID:18614016

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk] Biological Unit Coordinates (3d7t.pdb1.gz) 85 Kb Biological Unit Coordinates (3d7t.pdb2.gz) 84 Kb LPC: Ligand-Protein Contacts for 3D7T CSU: Contacts of Structural Units for 3D7T Likely Quarternary Molecular Structure file(s) for 3D7T Structure Factors (256 Kb) Retrieve 3D7T in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3D7T from S2C, [Save to disk] Re-refined 3d7t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3D7T in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3D7T

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3D7T, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3d7t_B] [3d7t_A] [3d7t] SWISS-PROT database: [P41240] [P00523] Domain organization of [CSK_HUMAN] [SRC_CHICK] by SWISSPFAM Domain found in 3D7T: [TyrKc ] by SMART

Other resources with information on 3D7T

Community annotation for 3D7T at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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