3DD3	Transferase	date	Jun 05, 2008
title	Crystal Structure Of The Glutathione Transferase Pi Enzyme I With The Bifunctional Inhibitor, Etharapta
authors	L.J.Parker
compound		source
Molecule: Glutathione S-Transferase P Chain: A, B Synonym: Gst Class-Pi, Gstp1-1, Glutathione Transferase Pi Ec: 2.5.1.18 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Gstp1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Top10 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pse420
symmetry	Space Group: C 1 2 1	R_factor 0.200 R_Free 0.260
crystal cell	length a length b length c angle alpha angle beta angle gamma 76.690 89.540 68.990 90.00 97.81 90.00
method	X-Ray Diffraction	resolution	2.25 Å
ligand	GSH, MES, RUC	enzyme	Transferase E.C.2.5.1.18 BRENDA
Gene Ontology	Chain Function Process Component A, B glutathione peroxidase activ... protein binding
Primary reference	Rational design of an organometallic glutathione transferase inhibitor., Ang WH, Parker LJ, De Luca A, Juillerat-Jeanneret L, Morton CJ, Lo Bello M, Parker MW, Dyson PJ, Angew Chem Int Ed Engl. 2009;48(21):3854-7. PMID:19396894

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk] Biological Unit Coordinates (3dd3.pdb1.gz) 68 Kb LPC: Ligand-Protein Contacts for 3DD3 CSU: Contacts of Structural Units for 3DD3 Likely Quarternary Molecular Structure file(s) for 3DD3 Structure Factors (342 Kb) Retrieve 3DD3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DD3 from S2C, [Save to disk] Re-refined 3dd3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DD3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3DD3

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3DD3, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dd3_B] [3dd3_A] [3dd3] SWISS-PROT database: [P09211] Domain organization of [GSTP1_HUMAN] by SWISSPFAM

Other resources with information on 3DD3

Community annotation for 3DD3 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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