3DLS	Transferase	date	Jun 29, 2008
title	Crystal Structure Of Human Pas Kinase Bound To Adp
authors	S.Antonysamy, J.B.Bonanno, R.Romero, M.Russell, M.Iizuka, T.Gheyi S.R.Wasserman, J.Rutter, J.M.Sauder, S.K.Burley, New York Sgx R Center For Structural Genomics (Nysgxrc)
compound		source
Molecule: Pas Domain-Containing Serinethreonine-Protein Ki Chain: A, B, C, D, E, F Fragment: Protein Kinase Domain Synonym: Pas-Kinase, Paskin, Hpask Ec: 2.7.11.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pask, Kiaa0135 Expression_system: Baculovirus Expression_system_strain: Sf9
symmetry	Space Group: P 1	R_factor 0.241 R_Free 0.297
crystal cell	length a length b length c angle alpha angle beta angle gamma 85.778 85.840 94.154 77.28 77.50 60.09
method	X-Ray Diffraction	resolution	2.30 Å
ligand	ADP, MG	enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component F, A, D, C, E, B
Primary reference	Structural bases of PAS domain-regulated kinase (PASK) activation in the absence of activation loop phosphorylation., Kikani CK, Antonysamy SA, Bonanno JB, Romero R, Zhang FF, Russell M, Gheyi T, Iizuka M, Emtage S, Sauder JM, Turk BE, Burley SK, Rutter J, J Biol Chem. 2010 Dec 24;285(52):41034-43. Epub 2010 Oct 13. PMID:20943661

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (280 Kb) [Save to disk] Biological Unit Coordinates (3dls.pdb1.gz) 50 Kb Biological Unit Coordinates (3dls.pdb2.gz) 50 Kb Biological Unit Coordinates (3dls.pdb3.gz) 50 Kb Biological Unit Coordinates (3dls.pdb4.gz) 49 Kb Biological Unit Coordinates (3dls.pdb5.gz) 50 Kb Biological Unit Coordinates (3dls.pdb6.gz) 49 Kb Biological Unit Coordinates (3dls.pdb7.gz) 139 Kb Biological Unit Coordinates (3dls.pdb8.gz) 137 Kb LPC: Ligand-Protein Contacts for 3DLS CSU: Contacts of Structural Units for 3DLS Likely Quarternary Molecular Structure file(s) for 3DLS Structure Factors (667 Kb) Retrieve 3DLS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DLS from S2C, [Save to disk] Re-refined 3dls structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DLS in 3D

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Visual 3D analysis of 3DLS

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3DLS, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dls_F] [3dls] [3dls_E] [3dls_A] [3dls_C] [3dls_B] [3dls_D] SWISS-PROT database: [Q96RG2] Domain organization of [PASK_HUMAN] by SWISSPFAM Domain found in 3DLS: [S_TKc ] by SMART

Other resources with information on 3DLS

Community annotation for 3DLS at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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