3DRB Transferase date Jul 11, 2008
title Crystal Structure Of Human Brain-Type Creatine Kinase
authors J.H.Moon, S.M.Bong, K.Y.Hwang, Y.M.Chi
compound source
Molecule: Creatine Kinase B-Type
Chain: A, B
Synonym: Creatine Kinase B Chain, B-Ck
Ec: 2.7.3.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
symmetry Space Group: P 43 21 2
R_factor 0.196 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
97.720 97.720 166.910 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand ADP, MG enzyme Transferase E.C.2.7.3.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural studies of human brain-type creatine kinase complexed with the ADP-Mg2+-NO3- -creatine transition-state analogue complex., Bong SM, Moon JH, Nam KH, Lee KS, Chi YM, Hwang KY, FEBS Lett. 2008 Nov 26;582(28):3959-65. Epub 2008 Oct 31. PMID:18977227
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (132 Kb) [Save to disk]
  • Biological Unit Coordinates (3drb.pdb1.gz) 127 Kb
  • LPC: Ligand-Protein Contacts for 3DRB
  • CSU: Contacts of Structural Units for 3DRB
  • Likely Quarternary Molecular Structure file(s) for 3DRB
  • Structure Factors (698 Kb)
  • Retrieve 3DRB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DRB from S2C, [Save to disk]
  • Re-refined 3drb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3DRB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3DRB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3DRB, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3drb] [3drb_B] [3drb_A]
  • SWISS-PROT database: [P12277]
  • Domain organization of [KCRB_HUMAN] by SWISSPFAM
  • Other resources with information on 3DRB
  • Community annotation for 3DRB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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