3DRU	Hydrolase Inhibitor	date	Jul 11, 2008
title	Crystal Structure Of Gly117phe Alpha1-Antitrypsin
authors	B.Gooptu, I.Nobeli, A.Purkiss, R.L.Phillips, M.Mallya, D.A.Lomas, T.E.Barrett
compound		source
Molecule: Alpha-1-Antitrypsin Chain: A, B, C Synonym: Alpha-1 Protease Inhibitor, Alpha-1-Antiproteinase Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Serpina1, Aat, Pi, Pro0684, Pro2209 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Xl-1blue Expression_system_vector_type: Plasmid Expression_system_plasmid: Pqe31
symmetry	Space Group: P 1 21 1	R_factor 0.242 R_Free 0.290
crystal cell	length a length b length c angle alpha angle beta angle gamma 58.840 149.300 77.290 90.00 94.11 90.00
method	X-Ray Diffraction	resolution	3.20 Å
Gene Ontology	Chain Function Process Component A, C, B COPII vesicle coating
Primary reference	Crystallographic and Cellular Characterisation of Two Mechanisms Stabilising the Native Fold of alpha(1)-Antitrypsin: Implications for Disease and Drug Design., Gooptu B, Miranda E, Nobeli I, Mallya M, Purkiss A, Leigh Brown SC, Summers C, Phillips RL, Lomas DA, Barrett TE, J Mol Biol. 2009 Apr 10;387(4):857-68. Epub 2009 Feb 14. PMID:19232354

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (177 Kb) [Save to disk] Biological Unit Coordinates (3dru.pdb1.gz) 59 Kb Biological Unit Coordinates (3dru.pdb2.gz) 60 Kb Biological Unit Coordinates (3dru.pdb3.gz) 59 Kb CSU: Contacts of Structural Units for 3DRU Likely Quarternary Molecular Structure file(s) for 3DRU Structure Factors (1252 Kb) Retrieve 3DRU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DRU from S2C, [Save to disk] Re-refined 3dru structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DRU in 3D

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Visual 3D analysis of 3DRU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3DRU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dru_B] [3dru_A] [3dru_C] [3dru] SWISS-PROT database: [P01009] Domain organization of [A1AT_HUMAN] by SWISSPFAM Domain found in 3DRU: [SERPIN ] by SMART

Other resources with information on 3DRU

Community annotation for 3DRU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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