3E65 Oxidoreductase date Aug 14, 2008
title Murine Inos Dimer With Heme, Pterin And Inhibitor Ar-C120011
authors R.J.Rosenfeld, E.D.Garcin, E.D.Getzoff
compound source
Molecule: Nitric Oxide Synthase, Inducible
Chain: A, B
Fragment: Oxygenase Domain (Unp Residues 77-496)
Synonym: Inducible No Synthase, Inducible Nos, Inos, Nos Ty Macrophage Nos, Mac-Nos;
Ec: 1.14.13.39
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Nos2, Inosl
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 61 2 2
R_factor 0.249 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
213.935 213.935 117.025 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.05 Å
ligand H4B, HEM, XXZ BindingDB enzyme Oxidoreductase E.C.1.14.13.39 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceAnchored plasticity opens doors for selective inhibitor design in nitric oxide synthase., Garcin ED, Arvai AS, Rosenfeld RJ, Kroeger MD, Crane BR, Andersson G, Andrews G, Hamley PJ, Mallinder PR, Nicholls DJ, St-Gallay SA, Tinker AC, Gensmantel NP, Mete A, Cheshire DR, Connolly S, Stuehr DJ, Aberg A, Wallace AV, Tainer JA, Getzoff ED, Nat Chem Biol. 2008 Nov;4(11):700-7. Epub 2008 Oct 12. PMID:18849972
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (148 Kb) [Save to disk]
  • Biological Unit Coordinates (3e65.pdb1.gz) 142 Kb
  • Biological Unit Coordinates (3e65.pdb2.gz) 142 Kb
  • LPC: Ligand-Protein Contacts for 3E65
  • CSU: Contacts of Structural Units for 3E65
  • Likely Quarternary Molecular Structure file(s) for 3E65
  • Structure Factors (993 Kb)
  • Retrieve 3E65 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3E65 from S2C, [Save to disk]
  • Re-refined 3e65 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3E65 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3E65
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3E65, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3e65_B] [3e65] [3e65_A]
  • SWISS-PROT database: [P29477]
  • Domain organization of [NOS2_MOUSE] by SWISSPFAM
    • Other resources with information on 3E65
  • Community annotation for 3E65 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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