3EBS Oxidoreductase date Aug 28, 2008
title Human Cytochrome P450 2a6 I208si300fg301as369g In Complex Phenacetin
authors N.M.Devore, E.E.Scott
compound source
Molecule: Cytochrome P450 2a6
Chain: A, B, C, D
Fragment: Unp Residues 29 To 494
Synonym: Cypiia6, Coumarin 7-Hydroxylase, P450 Iia3, Cyp2a3
Ec: 1.14.14.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cyp2a6, Cyp2a3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Topp3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pkka2a6dh
symmetry Space Group: P 1 21 1
R_factor 0.211 R_Free 0.269
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.850 159.126 103.993 90.00 92.08 90.00
method X-Ray Diffractionresolution 2.15 Å
ligand HEM, N4E enzyme Oxidoreductase E.C.1.14.14.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceKey Residues Controlling Phenacetin Metabolism by Human Cytochrome P450 2A Enzymes., Devore NM, Smith BD, Urban MJ, Scott EE, Drug Metab Dispos. 2008 Sep 8. PMID:18779312
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (309 Kb) [Save to disk]
  • Biological Unit Coordinates (3ebs.pdb1.gz) 78 Kb
  • Biological Unit Coordinates (3ebs.pdb2.gz) 79 Kb
  • Biological Unit Coordinates (3ebs.pdb3.gz) 78 Kb
  • Biological Unit Coordinates (3ebs.pdb4.gz) 79 Kb
  • LPC: Ligand-Protein Contacts for 3EBS
  • CSU: Contacts of Structural Units for 3EBS
  • Likely Quarternary Molecular Structure file(s) for 3EBS
  • Structure Factors (1769 Kb)
  • Retrieve 3EBS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3EBS from S2C, [Save to disk]
  • Re-refined 3ebs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3EBS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3EBS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3EBS, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ebs_A] [3ebs_C] [3ebs] [3ebs_D] [3ebs_B]
  • SWISS-PROT database: [P11509]
  • Domain organization of [CP2A6_HUMAN] by SWISSPFAM
  • Other resources with information on 3EBS
  • Community annotation for 3EBS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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