3EIY	Hydrolase	date	Sep 17, 2008
title	Crystal Structure Of Inorganic Pyrophosphatase From Burkhold Pseudomallei With Bound Pyrophosphate
authors	Seattle Structural Genomics Center For Infectious Disease (S
compound		source
Molecule: Inorganic Pyrophosphatase Chain: A Ec: 3.6.1.1 Engineered: Yes		Organism_scientific: Burkholderia Pseudomallei 1710b Organism_taxid: 320372 Gene: Ppa, Burps1710b_1237 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Ava0421
symmetry	Space Group: P 63 2 2	R_factor 0.211 R_Free 0.249
crystal cell	length a length b length c angle alpha angle beta angle gamma 100.952 100.952 111.233 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	K, NA, PEG, PG4, POP	enzyme	Hydrolase E.C.3.6.1.1 BRENDA
Gene	BURPS1710B
Gene Ontology	Chain Function Process Component A
Primary reference	Combining functional and structural genomics to sample the essential Burkholderia structome., Baugh L, Gallagher LA, Patrapuvich R, Clifton MC, Gardberg AS, Edwards TE, Armour B, Begley DW, Dieterich SH, Dranow DM, Abendroth J, Fairman JW, Fox D 3rd, Staker BL, Phan I, Gillespie A, Choi R, Nakazawa-Hewitt S, Nguyen MT, Napuli A, Barrett L, Buchko GW, Stacy R, Myler PJ, Stewart LJ, Manoil C, Van Voorhis WC, PLoS One. 2013;8(1):e53851. doi: 10.1371/journal.pone.0053851. Epub 2013 Jan 31. PMID:23382856

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk] Biological Unit Coordinates (3eiy.pdb1.gz) 174 Kb Biological Unit Coordinates (3eiy.pdb2.gz) 89 Kb Biological Unit Coordinates (3eiy.pdb3.gz) 31 Kb LPC: Ligand-Protein Contacts for 3EIY CSU: Contacts of Structural Units for 3EIY Likely Quarternary Molecular Structure file(s) for 3EIY Structure Factors (298 Kb) Retrieve 3EIY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3EIY from S2C, [Save to disk] Re-refined 3eiy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3EIY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3EIY

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3EIY, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3eiy] [3eiy_A] SWISS-PROT database: [Q3JUV5] Domain organization of [Q3JUV5_BURP1] by SWISSPFAM

Other resources with information on 3EIY

Community annotation for 3EIY at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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