3EKK Transferase date Sep 19, 2008
title Insulin Receptor Kinase Complexed With An Inhibitor
authors S.Chamberlain, C.Atkins, F.Deanda, M.Dumble, R.Gerding, A.Groy, S.Korenchuk, R.Kumar, H.Lei, R.Mook, G.Moorthy, A.Redman, J.Rowla P.Sabbatini, L.Shewchuk
compound source
Molecule: Insulin Receptor
Chain: A
Fragment: Kinase Domain
Synonym: Ir, Insulin Receptor Subunit Alpha, Insulin Recept Beta;
Ec: 2.7.10.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Insr
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pfastbac
symmetry Space Group: P 21 21 21
R_factor 0.204 R_Free 0.260
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.251 70.487 88.600 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand GS2 enzyme Transferase E.C.2.7.10.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery of 4,6-bis-anilino-1H-pyrrolo[2,3-d]pyrimidines: Potent inhibitors of the IGF-1R receptor tyrosine kinase., Chamberlain SD, Wilson JW, Deanda F, Patnaik S, Redman AM, Yang B, Shewchuk L, Sabbatini P, Leesnitzer MA, Groy A, Atkins C, Gerding R, Hassell AM, Lei H, Mook RA Jr, Moorthy G, Rowand JL, Stevens KL, Kumar R, Shotwell JB, Bioorg Med Chem Lett. 2008 Nov 18. PMID:19056263
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (3ekk.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 3EKK
  • CSU: Contacts of Structural Units for 3EKK
  • Likely Quarternary Molecular Structure file(s) for 3EKK
  • Structure Factors (322 Kb)
  • Retrieve 3EKK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3EKK from S2C, [Save to disk]
  • Re-refined 3ekk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3EKK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3EKK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3EKK, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ekk_A] [3ekk]
  • SWISS-PROT database: [P06213]
  • Domain organization of [INSR_HUMAN] by SWISSPFAM
  • Domain found in 3EKK: [TyrKc ] by SMART
  • Other resources with information on 3EKK
  • Community annotation for 3EKK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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