3ESH Hydrolase date Oct 06, 2008
title Crystal Structure Of A Probable Metal-Dependent Hydrolase Fr Staphylococcus Aureus. Northeast Structural Genomics Target
authors J.Seetharaman, Y.Chen, H.Wang, H.Janjua, E.L.Foote, R.Xiao, R.Nair J.K.Everett, T.B.Acton, B.Rost, G.T.Montelione, L.Tong, J.F.Hunt Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Protein Similar To Metal-Dependent Hydrolase
Chain: A, B, C
Engineered: Yes
 Organism_scientific: Staphylococcus Aureus Subsp. Aureus Mu
Organism_taxid: 158878
Gene: Sav1747
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet 21
symmetry Space Group: P 42 21 2
R_factor 0.228 R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
113.110 113.110 155.807 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (142 Kb) [Save to disk]
  • Biological Unit Coordinates (3esh.pdb1.gz) 270 Kb
  • Biological Unit Coordinates (3esh.pdb2.gz) 136 Kb
  • LPC: Ligand-Protein Contacts for 3ESH
  • CSU: Contacts of Structural Units for 3ESH
  • Likely Quarternary Molecular Structure file(s) for 3ESH
  • Structure Factors (535 Kb)
  • Retrieve 3ESH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ESH from S2C, [Save to disk]
  • Re-refined 3esh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3ESH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3ESH, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3esh] [3esh_B] [3esh_C] [3esh_A]
  • SWISS-PROT database: [Q99TB7]
  • Domain organization of [Q99TB7_STAAM] by SWISSPFAM
  • Domain found in 3ESH: [Lactamase_B ] by SMART
    • Other resources with information on 3ESH
  • Community annotation for 3ESH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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