3EUZ Hydrolase date Oct 12, 2008
title Crystal Structure Of Ribonuclease A In 50% Dimethylformamide
authors M.Dechene, G.Wink, M.Smith, P.Swartz, C.Mattos
compound source
Molecule: Ribonuclease Pancreatic
Chain: A, B
Synonym: Rnase 1, Rnase A
Ec: 3.1.27.5
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Organ: Pancreas
symmetry Space Group: C 1 2 1
R_factor 0.194 R_Free 0.229
crystal
cell
length a length b length c angle alpha angle beta angle gamma
100.683 32.793 72.608 90.00 90.44 90.00
method X-Ray Diffractionresolution 1.84 Å
ligand DMF enzyme Hydrolase E.C.3.1.27.5 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • ribonuclease A activity


  • Primary referenceMultiple solvent crystal structures of ribonuclease A: An assessment of the method., Dechene M, Wink G, Smith M, Swartz P, Mattos C, Proteins. 2009 Feb 2. PMID:19291738
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (3euz.pdb1.gz) 22 Kb
  • Biological Unit Coordinates (3euz.pdb2.gz) 22 Kb
  • LPC: Ligand-Protein Contacts for 3EUZ
  • CSU: Contacts of Structural Units for 3EUZ
  • Likely Quarternary Molecular Structure file(s) for 3EUZ
  • Structure Factors (271 Kb)
  • Retrieve 3EUZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3EUZ from S2C, [Save to disk]
  • Re-refined 3euz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3EUZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3EUZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3EUZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3euz] [3euz_A] [3euz_B]
  • SWISS-PROT database: [P61823]
  • Domain organization of [RNAS1_BOVIN] by SWISSPFAM
  • Domain found in 3EUZ: [RNAse_Pc ] by SMART
  • Other resources with information on 3EUZ
  • Community annotation for 3EUZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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