3F3M	Transferase	date	Oct 31, 2008
title	Six Crystal Structures Of Two Phosphopantetheine Adenylyltra Reveal An Alternative Ligand Binding Mode And An Associated Structural Change
authors	H.H.Lee, H.J.Yoon, S.W.Suh
compound		source
Molecule: Phosphopantetheine Adenylyltransferase Chain: A Synonym: Pantetheine-Phosphate Adenylyltransferase, Ppat, D Coa Pyrophosphorylase; Ec: 2.7.7.3 Engineered: Yes		Organism_scientific: Staphylococcus Aureus Organism_taxid: 1280 Gene: Coad Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-21a(+)
symmetry	Space Group: P 63 2 2	R_factor 0.211 R_Free 0.250
crystal cell	length a length b length c angle alpha angle beta angle gamma 66.774 66.774 124.134 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	PPS	enzyme	Transferase E.C.2.7.7.3 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	The structure of Staphylococcus aureus phosphopantetheine adenylyltransferase in complex with 3'-phosphoadenosine 5'-phosphosulfate reveals a new ligand-binding mode., Lee HH, Yoon HJ, Kang JY, Park JH, Kim do J, Choi KH, Lee SK, Song J, Kim HJ, Suh SW, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Oct 1;65(Pt 10):987-91., Epub 2009 Sep 23. PMID:19851003

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk] Biological Unit Coordinates (3f3m.pdb1.gz) 27 Kb LPC: Ligand-Protein Contacts for 3F3M CSU: Contacts of Structural Units for 3F3M Structure Factors (66 Kb) Retrieve 3F3M in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3F3M from S2C, [Save to disk] Re-refined 3f3m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3F3M in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3F3M

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3F3M, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3f3m] [3f3m_A] SWISS-PROT database: [P63820] Domain organization of [COAD_STAAW] by SWISSPFAM

Other resources with information on 3F3M

Community annotation for 3F3M at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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