3F3T Transferase date Oct 31, 2008
title Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type I
authors C.Gruetter, S.Klueter, M.Getlik, D.Rauh
compound source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Src
Chain: A, B
Fragment: Kinase Domain, Unp Residues 251-533
Synonym: Pp60c-Src, P60-Src, C-Src
Ec: 2.7.10.2
Engineered: Yes
Mutation: Yes
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pskb3
symmetry Space Group: P 1
R_factor 0.244 R_Free 0.295
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.010 63.490 74.990 78.71 89.71 89.91
method X-Ray Diffractionresolution 2.50 Å
ligand 1AU BindingDB enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceA new screening assay for allosteric inhibitors of cSrc., Simard JR, Kluter S, Grutter C, Getlik M, Rabiller M, Rode HB, Rauh D, Nat Chem Biol. 2009 Apr 26. PMID:19396179
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk]
  • Biological Unit Coordinates (3f3t.pdb1.gz) 44 Kb
  • Biological Unit Coordinates (3f3t.pdb2.gz) 43 Kb
  • LPC: Ligand-Protein Contacts for 3F3T
  • CSU: Contacts of Structural Units for 3F3T
  • Likely Quarternary Molecular Structure file(s) for 3F3T
  • Structure Factors (183 Kb)
  • Retrieve 3F3T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3F3T from S2C, [Save to disk]
  • Re-refined 3f3t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3F3T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3F3T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3F3T, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3f3t_A] [3f3t_B] [3f3t]
  • SWISS-PROT database: [P00523]
  • Domain organization of [SRC_CHICK] by SWISSPFAM
  • Domain found in 3F3T: [TyrKc ] by SMART
  • Other resources with information on 3F3T
  • Community annotation for 3F3T at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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