3F9I Oxidoreductase date Nov 13, 2008
title Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Rickettsia Prowazekii
authors Seattle Structural Genomics Center For Infectious Disease (S
compound source
Molecule: 3-Oxoacyl-[Acyl-Carrier-Protein] Reductase
Chain: A, B
Synonym: 3-Ketoacyl-Acyl Carrier Protein Reductase
Ec: 1.1.1.100
Engineered: Yes
Organism_scientific: Rickettsia Prowazekii
Organism_taxid: 782
Gene: Fabg, Rp762
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ava0421
symmetry Space Group: P 41 21 2
R_factor 0.213 R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
74.160 74.160 183.010 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.25 Å
ligand
enzyme Oxidoreductase E.C.1.1.1.100 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of 3-ketoacyl-(acyl-carrier-protein) reductase from Rickettsia prowazekii at 2.25 A resolution., Subramanian S, Abendroth J, Phan IQ, Olsen C, Staker BL, Napuli A, Van Voorhis WC, Stacy R, Myler PJ, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Sep 1;67(Pt, 9):1118-22. Epub 2011 Aug 16. PMID:21904060
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (3f9i.pdb1.gz) 132 Kb
  • CSU: Contacts of Structural Units for 3F9I
  • Likely Quarternary Molecular Structure file(s) for 3F9I
  • Structure Factors (370 Kb)
  • Retrieve 3F9I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3F9I from S2C, [Save to disk]
  • Re-refined 3f9i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3F9I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3F9I
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3F9I, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3f9i_A] [3f9i] [3f9i_B]
  • SWISS-PROT database: [P50941]
  • Domain organization of [FABG_RICPR] by SWISSPFAM
  • Other resources with information on 3F9I
  • Community annotation for 3F9I at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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