3FHR Transferase date Dec 10, 2008
title High Resolution Crystal Structure Of Mitogen-Activated Prote Activated Protein Kinase 3 (Mk3)-Inhibitor Complex
authors R.K.Y.Cheng, J.Barker, S.Palan, B.Felicetti, M.Whittaker, T.Heste
compound source
Molecule: Map Kinase-Activated Protein Kinase 3
Chain: A
Fragment: Kinase Domain, Unp Residues 33-349
Synonym: Mitogen-Activated Protein Kinase-Activated Protein (Mk3), Mapk-Activated Protein Kinase 3, Mapkap Kinase 3, Ma Chromosome 3p Kinase, 3pk;
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta 2 (De3)
Expression_system_vector_type: Vector
Expression_system_vector: Proprietary Vector
symmetry Space Group: C 1 2 1
R_factor 0.226 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
84.688 74.832 60.664 90.00 107.34 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand P4O BindingDB enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHigh-resolution crystal structure of human Mapkap kinase 3 in complex with a high affinity ligand., Cheng R, Felicetti B, Palan S, Toogood-Johnson I, Scheich C, Barker J, Whittaker M, Hesterkamp T, Protein Sci. 2009 Nov 20. PMID:19937655
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (3fhr.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 3FHR
  • CSU: Contacts of Structural Units for 3FHR
  • Structure Factors (418 Kb)
  • Retrieve 3FHR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FHR from S2C, [Save to disk]
  • Re-refined 3fhr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FHR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FHR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3FHR, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fhr] [3fhr_A]
  • SWISS-PROT database: [Q16644]
  • Domain organization of [MAPK3_HUMAN] by SWISSPFAM
  • Domain found in 3FHR: [S_TKc ] by SMART
  • Other resources with information on 3FHR
  • Community annotation for 3FHR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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