3FL7	Transferase, Signaling Protein	date	Dec 18, 2008
title	Crystal Structure Of The Human Ephrin A2 Ectodomain
authors	J.R.Walker, L.Yermekbayeva, A.Seitova, C.Butler-Cole, C.Bountra, J.Weigelt, C.H.Arrowsmith, A.M.Edwards, A.Bochkarev, S.Dhe-Paga Structural Genomics Consortium (Sgc)
compound		source
Molecule: Ephrin Receptor Chain: A Fragment: Ectodomain, Unp Residues 23-531 Ec: 2.7.10.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Eck, Epha2, Hcg_24712, Rp11-276h7.1-001 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_strain: Sf9 Expression_system_vector_type: Plasmid Expression_system_vector: Baculovirus Expression_system_plasmid: Pfhmsp-Lic-N
symmetry	Space Group: P 21 21 2	R_factor 0.246 R_Free 0.299
crystal cell	length a length b length c angle alpha angle beta angle gamma 59.358 89.992 136.476 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	CL, NA, NAG	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene	HCG
Gene Ontology	Chain Function Process Component A
Primary reference	Architecture of Eph receptor clusters., Himanen JP, Yermekbayeva L, Janes PW, Walker JR, Xu K, Atapattu L, Rajashankar KR, Mensinga A, Lackmann M, Nikolov DB, Dhe-Paganon S, Proc Natl Acad Sci U S A. 2010 May 26. PMID:20505120

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (161 Kb) [Save to disk] Biological Unit Coordinates (3fl7.pdb1.gz) 305 Kb Biological Unit Coordinates (3fl7.pdb2.gz) 154 Kb LPC: Ligand-Protein Contacts for 3FL7 CSU: Contacts of Structural Units for 3FL7 Likely Quarternary Molecular Structure file(s) for 3FL7 Structure Factors (374 Kb) Retrieve 3FL7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3FL7 from S2C, [Save to disk] Re-refined 3fl7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3FL7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3FL7

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3FL7, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3fl7] [3fl7_A] SWISS-PROT database: [P29317] Domain organization of [EPHA2_HUMAN] by SWISSPFAM Domains found in 3FL7: [EGF_like] [EPH_lbd] [FN3 ] by SMART

Other resources with information on 3FL7

Community annotation for 3FL7 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---