3FQM	Metal Binding Protein	date	Jan 07, 2009
title	Crystal Structure Of A Novel Dimeric Form Of Hcv Ns5a Domain
authors	R.A.Love
compound		source
Molecule: Non-Structural Protein 5a Chain: A, B Fragment: Hcv Ns5a Synonym: Ns5a Engineered: Yes		Organism_scientific: Hepatitis C Virus (Isolate Con1) Organism_common: Hcv Organism_taxid: 333284 Strain: Hcv Genotype 1b; Subtype Con1 Gene: Nonstructural Protein 5a Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet24a
symmetry	Space Group: P 31 2 1	R_factor 0.247 R_Free 0.288
crystal cell	length a length b length c angle alpha angle beta angle gamma 57.165 57.165 195.385 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	GOL, ZN	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	CRYSTAL STRUCTURE OF A NOVEL DIMERIC FORM OF NS5A DOMAIN I PROTEIN FROM HEPATITIS C VIRUS., Love RA, Brodsky O, Hickey MJ, Wells PA, Cronin CN, J Virol. 2009 Feb 25. PMID:19244328

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk] Biological Unit Coordinates (3fqm.pdb1.gz) 54 Kb LPC: Ligand-Protein Contacts for 3FQM CSU: Contacts of Structural Units for 3FQM Likely Quarternary Molecular Structure file(s) for 3FQM Structure Factors (433 Kb) Retrieve 3FQM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3FQM from S2C, [Save to disk] Re-refined 3fqm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3FQM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3FQM

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3FQM, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3fqm_B] [3fqm_A] [3fqm] SWISS-PROT database: [Q9WMX2] Domain organization of [POLG_HCVCO] by SWISSPFAM

Other resources with information on 3FQM

Community annotation for 3FQM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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