3FR9 Transferase date Jan 08, 2009
title Tetramerization And Cooperativity In Plasmodium Falciparum G Transferase Are Mediated By The Atypic Loop 113-118
authors M.Perbandt, E.Liebau, G.Ricci
compound source
Molecule: Glutathione S-Transferase
Chain: A, B
Synonym: Pfgst
Ec: 2.5.1.18
Engineered: Yes
Organism_scientific: Plasmodium Falciparum
Organism_taxid: 5833
Gene: Gst
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pjc20
symmetry Space Group: P 21 21 21
R_factor 0.240 R_Free 0.296
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.402 68.352 122.667 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand CL, GSH enzyme Transferase E.C.2.5.1.18 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (3fr9.pdb1.gz) 67 Kb
  • LPC: Ligand-Protein Contacts for 3FR9
  • CSU: Contacts of Structural Units for 3FR9
  • Structure Factors (289 Kb)
  • Retrieve 3FR9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FR9 from S2C, [Save to disk]
  • Re-refined 3fr9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FR9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FR9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3FR9, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fr9_A] [3fr9] [3fr9_B]
  • SWISS-PROT database: [Q8MU52]
  • Domain organization of [GST_PLAFA] by SWISSPFAM
  • Other resources with information on 3FR9
  • Community annotation for 3FR9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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