3FUP Transferase date Jan 14, 2009
title Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
authors N.K.Williams, R.S.Bamert, O.Patel, E.Fantino, J.Rossjohn, I.S.Luc
compound source
Molecule: Tyrosine-Protein Kinase Jak2
Chain: A, B
Fragment: Catalytic Domain
Synonym: Janus Kinase 2, Jak-2
Ec: 2.7.10.2
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Jak2, Jak2 (Amino Acids 843 - 1132)
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_strain: Dh10 Bac
Expression_system_vector_type: Virus
Expression_system_plasmid: Pfastbac
symmetry Space Group: P 41
R_factor 0.178 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
110.491 110.491 70.317 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand MI1, PTR BindingDB enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDissecting specificity in the Janus kinases: the structures of JAK-specific inhibitors complexed to the JAK1 and JAK2 protein tyrosine kinase domains., Williams NK, Bamert RS, Patel O, Wang C, Walden PM, Wilks AF, Fantino E, Rossjohn J, Lucet IS, J Mol Biol. 2009 Mar 20;387(1):219-32. Epub 2009 Jan 29. PMID:19361440
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk]
  • Biological Unit Coordinates (3fup.pdb1.gz) 50 Kb
  • Biological Unit Coordinates (3fup.pdb2.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 3FUP
  • CSU: Contacts of Structural Units for 3FUP
  • Likely Quarternary Molecular Structure file(s) for 3FUP
  • Structure Factors (492 Kb)
  • Retrieve 3FUP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FUP from S2C, [Save to disk]
  • Re-refined 3fup structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FUP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FUP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3FUP, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fup] [3fup_A] [3fup_B]
  • SWISS-PROT database: [O60674]
  • Domain organization of [JAK2_HUMAN] by SWISSPFAM
  • Domain found in 3FUP: [TyrKc ] by SMART
  • Other resources with information on 3FUP
  • Community annotation for 3FUP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science