3FW3 Lyase date Jan 16, 2009
title Crystal Structure Of Soluble Domain Of Ca4 In Complex With D
authors S.E.Greasley, R.A.A.Ferre, R.Paz, J.Wickersham
compound source
Molecule: Carbonic Anhydrase 4
Chain: A, B
Fragment: Soluble Domain
Synonym: Carbonic Anhydrase Iv, Ca-Iv, Carbonate Dehydratas
Ec: 4.2.1.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ca4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.176 R_Free 0.206
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.991 70.826 71.774 90.00 91.91 90.00
method X-Ray Diffractionresolution 1.72 Å
ligand ETS, GLC, SO4, ZN BindingDB enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThioether benzenesulfonamide inhibitors of carbonic anhydrases II and IV: structure-based drug design, synthesis, and biological evaluation., Vernier W, Chong W, Rewolinski D, Greasley S, Pauly T, Shaw M, Dinh D, Ferre RA, Nukui S, Ornelas M, Reyner E, Bioorg Med Chem. 2010 May 1;18(9):3307-19. Epub 2010 Mar 11. PMID:20363633
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk]
  • Biological Unit Coordinates (3fw3.pdb1.gz) 44 Kb
  • Biological Unit Coordinates (3fw3.pdb2.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 3FW3
  • CSU: Contacts of Structural Units for 3FW3
  • Structure Factors (807 Kb)
  • Retrieve 3FW3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FW3 from S2C, [Save to disk]
  • Re-refined 3fw3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FW3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FW3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3FW3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fw3] [3fw3_B] [3fw3_A]
  • SWISS-PROT database: [P22748]
  • Domain organization of [CAH4_HUMAN] by SWISSPFAM
  • Domain found in 3FW3: [Carb_anhydrase ] by SMART
  • Other resources with information on 3FW3
  • Community annotation for 3FW3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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