3G25	Transferase	date	Jan 30, 2009
title	1.9 Angstrom Crystal Structure Of Glycerol Kinase (Glpk) Fro Staphylococcus Aureus In Complex With Glycerol.
authors	G.Minasov, T.Skarina, O.Onopriyenko, A.Savchenko, W.F.Anderson, C Structural Genomics Of Infectious Diseases (Csgid)
compound		source
Molecule: Glycerol Kinase Chain: A, B, C, D Synonym: Atp:Glycerol 3-Phosphotransferase, Glycerokinase, Ec: 2.7.1.30 Engineered: Yes		Organism_scientific: Staphylococcus Aureus Subsp. Aureus Co Organism_taxid: 93062 Strain: Staphylococcus Aureus Subsp. Aureus Col Gene: Glpk, Sacol1320 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21-De3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pmcsg
symmetry	Space Group: P 1 21 1	R_factor 0.193 R_Free 0.246
crystal cell	length a length b length c angle alpha angle beta angle gamma 63.750 193.742 91.669 90.00 103.60 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	GOL, MSE, NA, PO4	enzyme	Transferase E.C.2.7.1.30 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (363 Kb) [Save to disk] Biological Unit Coordinates (3g25.pdb1.gz) 180 Kb Biological Unit Coordinates (3g25.pdb2.gz) 352 Kb Biological Unit Coordinates (3g25.pdb3.gz) 178 Kb LPC: Ligand-Protein Contacts for 3G25 CSU: Contacts of Structural Units for 3G25 Likely Quarternary Molecular Structure file(s) for 3G25 Structure Factors (1306 Kb) Retrieve 3G25 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3G25 from S2C, [Save to disk] Re-refined 3g25 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3G25 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3G25

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3G25, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3g25_D] [3g25_A] [3g25_C] [3g25_B] [3g25] SWISS-PROT database: [Q5HGD2] Domain organization of [GLPK_STAAC] by SWISSPFAM

Other resources with information on 3G25

Community annotation for 3G25 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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