3GMZ	Hydrolase Hydrolase Inhibitor	date	Mar 15, 2009
title	Crystal Of Human Arginase In Complex With L-Ornithine. Resol A.
authors	L.Di Costanzo, D.W.Christianson
compound		source
Molecule: Arginase-1 Chain: A, B Synonym: Type I Arginase, Liver-Type Arginase Ec: 3.5.3.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Arg1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_plasmid: Pet11d
symmetry	Space Group: P 3	R_factor 0.147 R_Free 0.185
crystal cell	length a length b length c angle alpha angle beta angle gamma 90.392 90.392 69.422 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.43 Å
ligand	MN, ORN	enzyme	Hydrolase E.C.3.5.3.1 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Binding of alpha,alpha-Disubstituted Amino Acids to Arginase Suggests New Avenues for Inhibitor Design., Ilies M, Di Costanzo L, Dowling DP, Thorn KJ, Christianson DW, J Med Chem. 2011 Jul 18. PMID:21728378

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (108 Kb) [Save to disk] Biological Unit Coordinates (3gmz.pdb1.gz) 153 Kb Biological Unit Coordinates (3gmz.pdb2.gz) 153 Kb LPC: Ligand-Protein Contacts for 3GMZ CSU: Contacts of Structural Units for 3GMZ Structure Factors (803 Kb) Retrieve 3GMZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3GMZ from S2C, [Save to disk] Re-refined 3gmz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3GMZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3GMZ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3GMZ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3gmz_A] [3gmz_B] [3gmz] SWISS-PROT database: [P05089] Domain organization of [ARGI1_HUMAN] by SWISSPFAM

Other resources with information on 3GMZ

Community annotation for 3GMZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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