3GP0	Transferase Transferase Inhibitor	date	Mar 20, 2009
title	Crystal Structure Of Human Mitogen Activated Protein Kinase Beta) In Complex With Nilotinib
authors	P.Filippakopoulos, A.Barr, O.Fedorov, T.Keates, M.Soundararajan, E.Salah, N.Burgess-Brown, E.Ugochukwu, A.C.W.Pike, J.Muniz, A.Ro A.Chaikuad, F.Von Delft, C.H.Arrowsmith, A.M.Edwards, J.Weigelt C.Bountra, S.Knapp, Structural Genomics Consortium (Sgc)
compound		source
Molecule: Mitogen-Activated Protein Kinase 11 Chain: A Synonym: Mapk11, Mitogen-Activated Protein Kinase P38 Beta, Kinase P38 Beta, P38b, P38-2, Stress-Activated Protein Kina Ec: 2.7.11.24 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mapk11, Prkm11, Sapk2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)-R3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic28-Bsa4
symmetry	Space Group: P 21 21 21	R_factor 0.178 R_Free 0.232
crystal cell	length a length b length c angle alpha angle beta angle gamma 38.940 60.080 148.550 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	CL, EDO, NIL BindingDB	enzyme	Transferase E.C.2.7.11.24 BRENDA
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk] Biological Unit Coordinates (3gp0.pdb1.gz) 59 Kb LPC: Ligand-Protein Contacts for 3GP0 CSU: Contacts of Structural Units for 3GP0 Likely Quarternary Molecular Structure file(s) for 3GP0 Structure Factors (427 Kb) Retrieve 3GP0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3GP0 from S2C, [Save to disk] Re-refined 3gp0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3GP0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3GP0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3GP0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3gp0] [3gp0_A] SWISS-PROT database: [Q15759] Domain organization of [MK11_HUMAN] by SWISSPFAM Domain found in 3GP0: [S_TKc ] by SMART

Other resources with information on 3GP0

Community annotation for 3GP0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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