3GTJ | Transcription, Transferase Dna-Rna Hybri | date | Mar 27, 2009 |
||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
title | Backtracked Rna Polymerase II Complex With 13mer Rna | ||||||||||||||
authors | D.Wang, D.A.Bushnell, X.Huang, K.D.Westover, M.Levitt, R.D.Kornbe | ||||||||||||||
compound | source | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb1 Chain: A Fragment: Dna-Directed Rna Polymerase II Largest Subunit Synonym: Rna Polymerase II Subunit B1, Rna Polymerase II Su Dna-Directed Rna Polymerase III Largest Subunit, Rna Polyme Subunit B220; Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb2 Chain: B Fragment: Dna-Directed Rna Polymerase II 140 Kda Polypeptid Synonym: Rna Polymerase II Subunit 2, Dna-Directed Rna Poly 140 Kda Polypeptide, B150; Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb3 Chain: C Fragment: Dna-Directed Rna Polymerase II 45 Kda Polypeptide Synonym: Rna Polymerase II Subunit B3, Rna Polymerase II Su Dna-Directed Rna Polymerase II 45 Kda Polypeptide, B44.5; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: E Fragment: Dna-Directed Rna Polymerases I, II, And III 27 Kd Polypeptide; Synonym: Rna Polymerases I, II, And III Subunit Abc1, Dna-D Rna Polymerases I, II, And III 27 Kda Polypeptide, Abc27; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: F Fragment: Dna-Directed Rna Polymerases I, II, And III 23 Kd Polypeptide; Synonym: Rna Polymerases I, II, And III Subunit Abc2, Dna-D Rna Polymerases I, II, And III 23 Kda Polypeptide, Abc23; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: H Fragment: Dna-Directed Rna Polymerases I, II, And III 14.5 Polypeptide; Synonym: Rna Polymerases I, II, And III Subunit Abc3, Dna-D Rna Polymerases I, II, And III 14.5 Kda Polypeptide, Abc14. Abc14.4; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb9 Chain: I Fragment: Dna-Directed Rna Polymerase II Subunit 9 Synonym: Rna Polymerase II Subunit B9, Dna-Directed Rna Pol Subunit 9, Dna-Directed Rna Polymerase II 14.2 Kda Polypept B12.6; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: J Fragment: Dna-Directed Rna Polymerases IIIIII Subunit 10 Synonym: Rna Polymerases I, II, And III Subunit Abc5, Dna-D Rna Polymerases I, II, And III 8.3 Kda Polypeptide, Abc10-B |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb11 Chain: K Fragment: Dna-Directed Rna Polymerase II 13.6 Kda Polypepti Synonym: Rna Polymerase II Subunit B11, Dna-Directed Rna Po II 13.6 Kda Polypeptide, B13.6; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: L Fragment: Dna-Directed Rna Polymerases I, II, And III 7.7 K Polypeptide; Synonym: Rna Polymerases I, II, And III Subunit Abc4, Abc10 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Rna (5'-R(Apupcpgpapgpapgpgpapupgpc) Chain: R Fragment: Rna Strand Engineered: Yes Other_details: Rna Strand |
Synthetic: Yes Other_details: Synthetic Rna | ||||||||||||||
Molecule: Dna (28-Mer) Chain: T Fragment: Dna Template Strand Engineered: Yes Other_details: Dna Template Strand |
Synthetic: Yes Other_details: Synthetic Template Dna | ||||||||||||||
Molecule: Dna (5'-D(Cptpgpcptptpaptpcpgpgptpap Chain: N Fragment: Dna Non-Template Strand Engineered: Yes Other_details: Dna Non-Template Strand |
Synthetic: Yes Other_details: Synthetic Non-Template Dna | ||||||||||||||
symmetry | Space Group: C 1 2 1 |
| |||||||||||||
crystal cell |
| ||||||||||||||
method | X-Ray Diffraction | resolution | 3.42 Å | ||||||||||||
ligand | MG, ZN | enzyme | Transferase E.C.2.7.7.6 BRENDA | ||||||||||||
Gene Ontology | |||||||||||||||
Primary reference | Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution., Wang D, Bushnell DA, Huang X, Westover KD, Levitt M, Kornberg RD, Science. 2009 May 29;324(5931):1203-6. PMID:19478184 |
Data retrieval |
View 3GTJ in 3D |
Visual 3D analysis of 3GTJ |
Structure-derived information |
Sequence-derived information |
Other resources with information on 3GTJ |
Movements, Movies and Images |
OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |